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Update our docstrings for clarity. Also remove vestigial references to PDFs.

Closes #268.
Closes #269.

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codecov bot commented Dec 17, 2025

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 99.93%. Comparing base (f5fc9ac) to head (7366ae7).
⚠️ Report is 2 commits behind head on main.

Additional details and impacted files
@@           Coverage Diff           @@
##             main     #273   +/-   ##
=======================================
  Coverage   99.92%   99.93%           
=======================================
  Files          24       24           
  Lines        1398     1446   +48     
=======================================
+ Hits         1397     1445   +48     
  Misses          1        1           
Files with missing lines Coverage Δ
tests/test_morphapp.py 100.00% <100.00%> (ø)

... and 1 file with indirect coverage changes

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this is getting much better. Still a few things to look at.


**Changed:**

* Docstrings updated for better clarity
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this is a fix not a change. Changes refer to changes in user-functionality

help="""Look for FIELD in a serial file instead.
Must specify name of serial file SERIALFILE.""",
help=(
"Look for FIELD in a serial file instead. "
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What is a "serial file"? I think we need some more user-friendly text to help with understanding here.

"entry, there should be a key {__save_morph_as__} whose value "
"specifies the name to save the manipulated function as."
"using a serial file NAMESFILE. The format of NAMESFILE should "
"be as follows: each target PDF is an entry in NAMESFILE. "
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I think we want PDF out here? function instead?

@sbillinge sbillinge merged commit d4b0079 into diffpy:main Dec 18, 2025
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Swapped docstrings for --multiple-targets vs --multiple-morphs? doc: update help messages in the CLI

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